Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793890.1_cds_XP_016435965.1_3103
CDS Infomation

[gene=LOC107762150] [db_xref=GeneID:107762150] [protein=AAA-ATPase At5g57480-like] [protein_id=XP_016435965.1] [location=complement(3348..4814)] [gbkey=CDS]
Sequence

ATGAGAGAATTGTGGACAACGCTGGCATCAATGATGGGGGTATGGGCTTTCAGTCAAAGC
CTCCTTCAAACAGTTTTCCCAGCAGAAGTCCGTTTTGCGTCCCTCAAATTCATCCATCGC
ATCTGCAACTGGTTCTCTGCCTATTGCTACTATGACATAACGGAGATCGACGGCGTTAAT
ACGAATGAGCTTTACAACGCCGTTCAACTCTACCTGAGCAGCTCTGCCTCCATCACCGGG
AATCGCCTCAGTCTCACAAGGGGACTCAATTCCAGCAGCATCACTTTTGGGCTGTCCAAT
AACGATTCCCTCATTGACACATTCAATGGTGTTAAAGTCCTGTGGGAACACGTGGTCATC
CCAAGGCAGGCCCAGACATTTTCATGGCGTCCGCTCCCAGAAGAGAAAAGGGGTTTCCTC
CTACGTGCCAAGAAGAAAGACAAAGCAGTGGTGTTGGGCTCTTATCTGGATTTTGTCATG
GAAAAGGCAAATGAAATTAGGAGGAAAAACCAAGATCGGTTGCTGTACACGAATTCACGT
GGGGGTTCACTTGATTCCAGAGGCCATCCTTGGGAGTCGGTACCCTTTAAACATCCCAGT
ACTTTTGATACACTTGCTATGGATCCTCACAAAAAGGCTGAGATTATGGCAGATCTTTTG
GATTTTGCGAATGGAGAATCTTTTTATCAGACAACTGGGAGGGCTTGGAAAAGGGGTTAC
CTTCTTTACGGACCACCAGGGACAGGCAAGTCTAGCATGATTGCTGCCATGGCCAATTTT
CTTGGTTATGATATTTATGATCTTGAATTAACCGAGGTCCACACTAACTCCGAGCTCAGG
AAGTTGTTGATGAAGACGAGTTCTAAATCTATCATTGTCATTGAGGATATTGATTGCTCT
ATCAATTTGACTAACAGGAAAAATAATAGCACCCATTCATTCTCACCTCCAGGAGCAGGA
GCAGGAGCAGGGAGCAATGAAGACGGTGGGAATACTATAACTCTTTCTGGTTTGTTAAAT
TTTACTGATGGTTTGTGGTCATGTTGTGGCACTGAGAGGATATTTGTGTTCACAACTAAT
CACATTGAGAAGCTTGATCCTGCACTGTTGAGGAGTGGGAGAATGGACATGCACATTCAC
ATGAGTTATTGCTCTTTTGCCGCACTCAAGATTCTCTTGAAGAATTACTTGGGATACGAC
GATGATGATGTGGAGAAGCAACTTCTTGAGCAATTAGAGCAAGTAATTGAAAAAGCTGAA
ATGACACCTGCTGATATAAGTGAGGTGTTAATCAAGAATAGGAGGAATAAAAACAAGGCT
GTTTGGGAATTGCTAGAAGCTTTGAGGACAAGGGCTGAGAGGAATGATGCTGTAAAATCA
AGTGCGGACGATGAAGAGCAAGAGAAAAGGGCATTAGAGAGTCCTAAAGAAGCAAAGTGT
GACGAGGAAAAAGAATCATCAGGATGA

Peptide Sequence

PEP ID

XP_016435965.1
PEP Infomation

PREDICTED: AAA-ATPase At5g57480-like [Nicotiana tabacum]
Sequence

MRELWTTLASMMGVWAFSQSLLQTVFPAEVRFASLKFIHRICNWFSAYCYYDITEIDGVN
TNELYNAVQLYLSSSASITGNRLSLTRGLNSSSITFGLSNNDSLIDTFNGVKVLWEHVVI
PRQAQTFSWRPLPEEKRGFLLRAKKKDKAVVLGSYLDFVMEKANEIRRKNQDRLLYTNSR
GGSLDSRGHPWESVPFKHPSTFDTLAMDPHKKAEIMADLLDFANGESFYQTTGRAWKRGY
LLYGPPGTGKSSMIAAMANFLGYDIYDLELTEVHTNSELRKLLMKTSSKSIIVIEDIDCS
INLTNRKNNSTHSFSPPGAGAGAGSNEDGGNTITLSGLLNFTDGLWSCCGTERIFVFTTN
HIEKLDPALLRSGRMDMHIHMSYCSFAALKILLKNYLGYDDDDVEKQLLEQLEQVIEKAE
MTPADISEVLIKNRRNKNKAVWELLEALRTRAERNDAVKSSADDEEQEKRALESPKEAKC
DEEKESSG

Transcript Sequence

Gene sequence data has not been registered.